New review: The pectin metabolizing capacity of the human gut microbiota

Ecem Yuksel, Remco Kort, and colleagues wrote a new review about the different bacteria in our intestines that can degrade a certain kind of dietary fiber called pectin, and how this can benefit our gut health. Check out the review here! (Picture from here)

The human gastrointestinal microbiota, densely populated with a diverse array of microorganisms primarily from the bacterial phyla Bacteroidota, Bacillota, and Actinomycetota, is crucial for maintaining health and physiological functions. Dietary fibers, particularly pectin, significantly influence the composition and metabolic activity of the gut microbiome. Pectin is fermented by gut bacteria using carbohydrate-active enzymes (CAZymes), resulting in the production of short-chain fatty acids (SCFAs) such as acetate, propionate, and butyrate, which provide various health benefits. The gastrointestinal microbiota has evolved to produce CAZymes that target different pectin components, facilitating cross-feeding within the microbial community. This review explores the fermentation of pectin by various gut bacteria, focusing on the involved transport systems, CAZyme families, SCFA synthesis capacity, and effects on microbial ecology in the gut. It addresses the complexities of the gut microbiome’s response to pectin and highlights the importance of microbial cross-feeding in maintaining a balanced and diverse gut ecosystem. Through a systematic analysis of pectinolytic CAZyme production, this review provides insights into the enzymatic mechanisms underlying pectin degradation and their broader implications for human health, paving the way for more targeted and personalized dietary strategies.

Bas speaks at VU’s Opening Academic Year

The new academic year kicked off on 2 September 2024 with the Opening Academic Year. This year’s theme was ‘Reasons for Hope’. Bas was interviewed as part of the panel and spoke as the Director of AIMMS about how we are committed to making a positive impact on life and the environment by accelerating breakthroughs in molecular science. He also highlighted our initiatives to unite a new generation of thinkers to address complex societal challenges, including organizing hackathons.